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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015851994.1_cds_XP_016511672.1_24390
CDS Infomation

[gene=LOC107828807] [db_xref=GeneID:107828807] [protein=two-component response regulator-like APRR2 isoform X2] [protein_id=XP_016511672.1] [location=join(6058..6190,6847..6926,7232..7298,7665..7711,7822..7899,7997..8551,9188..9328,9837..10115,10423..10491,10618..10692,11338..11505)] [gbkey=CDS]
Sequence

ATGATTTGTACTGAGGATGATCAATTATTGGGTTGGAAAGATTTTCCAAAGGGGCTTAAA
GTCCTACTTCTTGATGAAGACTGCAATTCTGCTTCAGAGATGAGATCAAGGCTTGAAAAA
TTGGATTACATAGTTTACTCATTCTGCAATGAGAATGAAGCTTTGTCTGCAATCTCAAAC
AAATCTGAGGACTTTCATGTTGCCATCGTGGAGGTAACTGCAGGCAACAGTGATGGAGTT
CTCCAATTTCTTGAGAGTGCCAAAGATCTGCCAACAATAATGACATCAAATATTCATTCC
CTTAGCACAATGATGAAGTGTATAGCGCTTGGTGCAGTCGAGTTTCTTCAGAAATCATTA
TCAGATGATAAACTCAAAAATATCTGGCAACATGTAGTTCGCAAGGCATCCAATGCTGGA
GAAAAAGATGTGCCCGAATCGCTTAAACCAGTAAAAGAATCTCTTGTTTCCGTGCCACAG
CTACAACCAGTAAAGAGTGCAGCAGGTGACAAAAGTTCAAACGAAACGGAACCTTTTACC
ACAGTACCAGGCAACAATAATGAACACTCATCAGGCTGTGATAAATACCCTGCTCCGTCA
ACCCCACAATTGAAACACGGAGTGAGGTCAGTGGACGATGGAGATTGCCAAGAGCATACC
ATCTTTTCAACTGAACAAGATAGTGGGGAGCATGATGGGGACGCTAAATCCGTCGAAACT
ACTTTTAACAATACAGTTGCTGAGAGTACTGTCCAAACAAGTCCTCGCGAGCAACAAGGA
CAGACTATTGTGAAAGAGGAGAATGGTTCATCTCCTCATCAAAAGATGGAGGCTGATATT
GCTACCTCTTCACCAAGTAACAACTGCCCTGACAATCGCACTAGTCATTCTGCTGAACCT
AGTAAAGCATCTGCTCCCCATAGTTCAAGTGGGACTAAAACCAATAAGAAGAAGATGAAG
GTAGATTGGTCACCTGAACTACACAAGAAGTTTGTTCAAGCAGTAGAGCAACTTGGTATT
GATCAAGCCATTCCTTCTCGAATACTAGAGCTGATGAAAGTGGAGGGTATAACGAGACAT
AACGTAGCTAGCCATCTCCAGAAATACAGAATGCATCGGAGGCAAATTTTGCCAAAGGAA
GTCGAAAGGAAATGGCCTCATCCACAACCTAGAGATTCAGTACAAAGGGGCTGCTATCCT
CATCATACACCTATCATGACCTTCCCACCATATCACTGTAATCATGTTCCCGCGGCTGGT
CAATTATATCCTGCTTGGGTACCACCAGCAAGTTATCCTAATGGTTTACAAGTGTGGGGT
TCACCTTACTATCCGGCATGGCAGCCTGCAGATTCTTGGCACTGGAATCCTCATCCAGGG
CTGCATGCTGATACATGGGGCTCCCCTGTCATGCCACCATCATTAGGATCATATCCACCA
TATCCTCAGAATGGTGGAGTTTACCGGCCTAACGGAATGCAGAATAGATATAGCATGCTA
GAGAAGTCATTTGATCTTCACCCGGCTGAGGAGGTTATTGATAAAGTAGTAAAGGAGGCA
ATAACCAAACCATGGTTGCCTCTTCCTTTGGGCCTAAAACGTCCTTCCACGGAGAGTGTT
CTTCGCGAGCTTTCAAGACAGGGGATCTCAACCGTCCCACCACAAATCAATGGCTCTCGC
GGTCGGAGCTGA

Peptide Sequence

PEP ID

XP_016511672.1
PEP Infomation

PREDICTED: two-component response regulator-like APRR2 isoform X2 [Nicotiana tabacum]
Sequence

MICTEDDQLLGWKDFPKGLKVLLLDEDCNSASEMRSRLEKLDYIVYSFCNENEALSAISN
KSEDFHVAIVEVTAGNSDGVLQFLESAKDLPTIMTSNIHSLSTMMKCIALGAVEFLQKSL
SDDKLKNIWQHVVRKASNAGEKDVPESLKPVKESLVSVPQLQPVKSAAGDKSSNETEPFT
TVPGNNNEHSSGCDKYPAPSTPQLKHGVRSVDDGDCQEHTIFSTEQDSGEHDGDAKSVET
TFNNTVAESTVQTSPREQQGQTIVKEENGSSPHQKMEADIATSSPSNNCPDNRTSHSAEP
SKASAPHSSSGTKTNKKKMKVDWSPELHKKFVQAVEQLGIDQAIPSRILELMKVEGITRH
NVASHLQKYRMHRRQILPKEVERKWPHPQPRDSVQRGCYPHHTPIMTFPPYHCNHVPAAG
QLYPAWVPPASYPNGLQVWGSPYYPAWQPADSWHWNPHPGLHADTWGSPVMPPSLGSYPP
YPQNGGVYRPNGMQNRYSMLEKSFDLHPAEEVIDKVVKEAITKPWLPLPLGLKRPSTESV
LRELSRQGISTVPPQINGSRGRS

Transcript Sequence

Gene sequence data has not been registered.